Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887452.1_cds_XP_016441824.1_37149
CDS Infomation

[gene=LOC107767362] [db_xref=GeneID:107767362] [protein=probable 26S proteasome non-ATPase regulatory subunit 3] [protein_id=XP_016441824.1] [location=complement(join(3166..3606,3709..3948,4151..4261,4345..4399,4473..4609,4713..4850,5463..5653,5972..6125))] [gbkey=CDS]
Sequence

ATGGAATTTTTAGCTTTTATCTCTGTTTTCTATCTTGCAATGGTTGTTGTCTTGATTTCT
CAAGTATTCTTCAAGACGAATCGAACGGTTAAGATTGAAGATCAATCAGCTCCTTCTGTG
TATGACTGCTCAGTTGATCCTTCTGTATTACAAGATTTGAAGGAGATAGCATCATTGATT
GAGAGTGGAGCAAATACAAGTGAAGTAAGGAAGATATACAAGGCTATGAGATTGACCATG
AAACTCAGGAGGAAACTAAAGGTTTCAATATTATCTGCTTTCTTGAATTATGCTCTTGGC
CCTGTTTCTGAGGTCCATGCACAGCTATCTTCATACCTGCCCCAGCAGGATAAATATGAC
ACCCAAGTTGATGTGGAAATGCCTGCAACAGAAGCCCATTCAAAACATCTGGTGCCTGAG
CTTGAGATCTATTGCTACTTGCTTGTTCTAATATTTCTGATTGATCAGAAGAAATACAAT
GAGGCTAAGGCTTGTTCCTCAAAAAGTATTGTTAGTCTAAAGAACATGAACAACAGAACT
GCTGATGTTCTTGCATCGAAGCTCTACTTTTACTACTCTTTAAGTTATGAATTTGCTGGT
GATTTCGCCGAAATTCGAGGTAACCTGCTTGCTTTGTACCAAATTGCAACAGTACGCCAT
AATAAGTTGAGTCAGGAAACACTTATCAATCTGTTATTGAGAAATTACCTTCACTACAAC
TTGTATGATCAAGCAGAAAAATTTCGCTCAAAGGCCCACTGTGTTGATGCTCTTTCAAAC
CAACAGCTCTGTCGATACCTCCTCTACCAGGGAAAGATCAAGACAATTCAGTTGGATTAC
ACAGATGCCAAAGATTCTCTTCTACAGGCTGTGCAGAAAAGTCCAGTAACTGCAGTTGGT
TTCCAAATACAATGCAATAAGTGGGCTATTATTGTCCAGTTATTGCTTGGAGAGATCCCT
GAGAGGACTGTTTTTACACAGAAAAGAATGGAGAAATCATTGAGGCCATACTTTGAGCTA
ACAAATGCTGTTCGCGTCGGAGATCTAGAGTTACTTAGAACTGTAGCTGTGAAATTTTCC
AGCACATTCAGCCAAGACAGAACAAGTAATTTGATTGTCAGACTCAGGCATAATGTCATT
AGGACAGGGCTTAGAAACATCAGCACCGCGTACTCACGTATATCACTGGCTGACATTGCC
AAGAAGCTAAACTTGGATTCTGAACATCCAGTTGATGATGCTGAAAACCTTGTAGCCAAA
GCAATTCGAGATGGTGCAATTGATGCCACAATAGACCATGCCAATAGATGGTTGGTATCA
AAAGCAACTGGAGATGTTTACTCCACAAATGAGCCTCAAATTGCTTTTAACTCAAGAATT
GCCTTCTGTCTTAATATGCACAATGAGGCTGTCCATGCTCTTCGATTTCCACAAAATTTG
AGCAATAAACAAAGTGTGGCGACGTAG

Peptide Sequence

PEP ID

XP_016441824.1
PEP Infomation

PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nicotiana tabacum]
Sequence

MEFLAFISVFYLAMVVVLISQVFFKTNRTVKIEDQSAPSVYDCSVDPSVLQDLKEIASLI
ESGANTSEVRKIYKAMRLTMKLRRKLKVSILSAFLNYALGPVSEVHAQLSSYLPQQDKYD
TQVDVEMPATEAHSKHLVPELEIYCYLLVLIFLIDQKKYNEAKACSSKSIVSLKNMNNRT
ADVLASKLYFYYSLSYEFAGDFAEIRGNLLALYQIATVRHNKLSQETLINLLLRNYLHYN
LYDQAEKFRSKAHCVDALSNQQLCRYLLYQGKIKTIQLDYTDAKDSLLQAVQKSPVTAVG
FQIQCNKWAIIVQLLLGEIPERTVFTQKRMEKSLRPYFELTNAVRVGDLELLRTVAVKFS
STFSQDRTSNLIVRLRHNVIRTGLRNISTAYSRISLADIAKKLNLDSEHPVDDAENLVAK
AIRDGAIDATIDHANRWLVSKATGDVYSTNEPQIAFNSRIAFCLNMHNEAVHALRFPQNL
SNKQSVAT

Transcript Sequence

Gene sequence data has not been registered.